euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

136 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip551 chr1 42483967 42483967 + unknown germline . no 228 HIVEP3
srip1809 chr1 75192898 75192898 - unknown germline . no 228 CRYZ
srip4139 chr1 149308430 149308430 + unknown germline . no 228 LOC645262
srip6233 chr1 194934643 194934643 - unknown germline . no 228 .
srip6857 chr1 221827812 221827812 - unknown germline . no 228 .
srip7083 chr1 231007805 231007805 . unknown germline . no 228 .
srip7378 chr1 242311568 242311568 + unknown germline . no 228 PLD5
srip7686 chr10 9525639 9525639 + unknown germline . no 228 .
srip7707 chr10 14310833 14310833 - unknown germline . no 228 FRMD4A
srip11841 chr10 124455225 124455225 + unknown germline . no 228 .
srip12543 chr11 15380252 15380252 + unknown germline . no 228 .
srip14259 chr11 41831804 41831804 - unknown germline . no 228 .
srip15377 chr11 58171843 58171843 + unknown germline . no 228 .
srip17180 chr11 94684368 94684368 + unknown germline . no 228 .
srip17657 chr11 104556129 104556129 - unknown germline . no 228 .
srip19283 chr11 134305645 134305645 - unknown germline . no 228 .
srip20148 chr12 12933687 12933687 - unknown germline . no 228 APOLD1
srip22222 chr12 43256979 43256979 - unknown germline . no 228 .
srip24408 chr12 84955208 84955208 - unknown germline . no 228 .
srip25109 chr12 95808454 95808454 - unknown germline . no 228 .
srip25373 chr12 103431469 103431469 - unknown germline . no 228 .
srip26099 chr12 120990857 120990857 . unknown germline . no 228 RNF10
srip26380 chr12 126802936 126802936 - unknown germline . no 228 .
srip26906 chr13 22489798 22489798 + unknown germline . no 228 .
srip27357 chr13 27488117 27488117 + unknown germline . no 228 .
srip28004 chr13 42771398 42771398 + unknown germline . no 228 DGKH
srip28588 chr13 61221164 61221164 - unknown germline . no 228 .
srip30983 chr13 79259790 79259790 - unknown germline . no 228 .
srip33538 chr13 104296230 104296230 - unknown germline . no 228 .
srip35578 chr14 34140131 34140131 - unknown germline . no 228 NPAS3
srip35884 chr14 36674754 36674754 + unknown germline . no 228 .
srip36305 chr14 39875089 39875089 + unknown germline . no 228 FBXO33
srip38620 chr14 86381803 86381803 - unknown germline . no 228 .
srip40233 chr15 47507335 47507335 - unknown germline . no 228 SEMA6D
srip41233 chr15 56251143 56251143 + unknown germline . no 228 NEDD4
srip42537 chr15 83551628 83551628 - unknown germline . no 228 HOMER2
srip44094 chr16 17755307 17755307 - unknown germline . no 228 .
srip46326 chr16 71028016 71028016 + unknown germline . no 228 HYDIN
srip46522 chr17 4314989 4314989 - unknown germline . no 228 .
srip47193 chr17 28398310 28398310 + unknown germline . no 228 EFCAB5
srip47698 chr17 32813627 32813627 + unknown germline . no 228 .
srip47896 chr17 34272157 34272157 + unknown germline . no 228 .
srip48964 chr18 15095255 15095255 - unknown germline . no 228 .
srip49061 chr18 23973399 23973399 - unknown germline . no 228 .
srip49168 chr18 27219193 27219193 - unknown germline . no 228 .
srip49439 chr18 28732910 28732910 - unknown germline . no 228 DSC1
srip50356 chr18 51425734 51425734 - unknown germline . no 228 .
srip50820 chr18 52396144 52396144 + unknown germline . no 228 .
srip51391 chr18 69390158 69390158 + unknown germline . no 228 .
srip51829 chr18 74960069 74960069 - unknown germline . no 228 .
srip52757 chr2 6798283 6798283 - unknown germline . no 228 .
srip52780 chr2 7050600 7050600 + unknown germline . no 228 .
srip53452 chr2 23191008 23191008 - unknown germline . no 228 .
srip53722 chr2 30053599 30053599 + unknown germline . no 228 ALK
srip53736 chr2 33141420 33141420 - unknown germline . no 228 LINC00486
srip53926 chr2 35879348 35879348 + unknown germline . no 228 .
srip54258 chr2 36570259 36570259 - unknown germline . no 228 .
srip54641 chr2 42051410 42051410 + unknown germline . no 228 .
srip57859 chr2 133034594 133034594 . unknown germline . no 228 .
srip57900 chr2 137426137 137426137 - unknown germline . no 228 .
srip61129 chr2 199779906 199779906 + unknown germline . no 228 .
srip62626 chr2 235519802 235519802 + unknown germline . no 228 .
srip63199 chr20 9477930 9477930 - unknown germline . no 228 .
srip63463 chr20 16479499 16479499 - unknown germline . no 228 KIF16B
srip64052 chr20 25903869 25903869 - unknown germline . no 228 .
srip65537 chr21 14390188 14390188 - unknown germline . no 228 .
srip65846 chr21 19517305 19517305 - unknown germline . no 228 .
srip66919 chr21 29069178 29069178 + unknown germline . no 228 .
srip67494 chr22 22486374 22486374 - unknown germline . no 228 IGL@
srip67839 chr22 22715594 22715594 + unknown germline . no 228 IGL@
srip68742 chr22 44324597 44324597 - unknown germline . no 228 PNPLA3
srip71077 chr3 26524455 26524455 - unknown germline . no 228 .
srip71897 chr3 38626071 38626071 + unknown germline . no 228 SCN5A
srip73790 chr3 75101217 75101217 + unknown germline . no 228 .
srip73930 chr3 75733774 75733774 - unknown germline . no 228 .
srip73936 chr3 75749887 75749887 . unknown germline . no 228 .
srip78653 chr3 151148549 151148549 - unknown germline . no 228 MED12L
srip80238 chr3 175677977 175677977 - unknown germline . no 228 .
srip80848 chr3 181192836 181192836 + unknown germline . no 228 .
srip83566 chr4 24319199 24319199 + unknown germline . no 228 .
srip83682 chr4 27740994 27740994 - unknown germline . no 228 .
srip83845 chr4 29321856 29321856 + unknown germline . no 228 .
srip84709 chr4 47007787 47007787 - unknown germline . no 228 .
srip85929 chr4 59622445 59622445 + unknown germline . no 228 .
srip85976 chr4 60979565 60979565 - unknown germline . no 228 .
srip87344 chr4 80768540 80768540 + unknown germline . no 228 GDEP
srip87681 chr4 82515393 82515393 - unknown germline . no 228 .
srip88888 chr4 103343748 103343748 + unknown germline . no 228 .
srip89019 chr4 104214679 104214679 + unknown germline . no 228 .
srip90344 chr4 115132699 115132699 + unknown germline . no 228 .
srip93873 chr4 158907280 158907280 - unknown germline . no 228 .
srip94046 chr4 165231734 165231734 - unknown germline . no 228 MARCH1
srip96071 chr5 8749521 8749521 + unknown germline . no 228 .
srip96930 chr5 21873984 21873984 . unknown germline . no 228 CDH12
srip97032 chr5 24207825 24207825 - unknown germline . no 228 .
srip97317 chr5 30246366 30246366 . unknown germline . no 228 .
srip97736 chr5 33633341 33633341 - unknown germline . no 228 ADAMTS12
srip98055 chr5 33797548 33797548 - unknown germline . no 228 ADAMTS12
srip100710 chr5 89450774 89450774 + unknown germline . no 228 .
srip103359 chr5 125040043 125040043 + unknown germline . no 228 .
srip103599 chr5 135023720 135023720 . unknown germline . no 228 .
srip105264 chr5 155619872 155619872 + unknown germline . no 228 .
srip108702 chr6 46310298 46310298 + unknown germline . no 228 .
srip109527 chr6 63368201 63368201 + unknown germline . no 228 .
srip112711 chr6 102283763 102283763 - unknown germline . no 228 GRIK2
srip113798 chr6 142450104 142450104 - unknown germline . no 228 .
srip114775 chr6 148195798 148195798 + unknown germline . no 228 .
srip115673 chr6 162181260 162181260 + unknown germline . no 228 PARK2
srip116062 chr7 5787402 5787402 + unknown germline . no 228 RNF216
srip117156 chr7 46350342 46350342 - unknown germline . no 228 .
srip117621 chr7 53652509 53652509 - unknown germline . no 228 .
srip117868 chr7 57768833 57768833 - unknown germline . no 228 LOC100287663
srip117920 chr7 58019695 58019695 . unknown germline . no 228 .
srip119676 chr7 84901723 84901723 - unknown germline . no 228 .
srip121168 chr7 107410612 107410612 . unknown germline . no 228 SLC26A3
srip121747 chr7 107829256 107829256 + unknown germline . no 228 NRCAM
srip122261 chr7 110484750 110484750 + unknown germline . no 228 IMMP2L
srip122556 chr7 118343815 118343815 . unknown germline . no 228 .
srip123335 chr7 142818659 142818659 + unknown germline . no 228 .
srip124066 chr8 4452901 4452901 - unknown germline . no 228 CSMD1
srip124377 chr8 5829282 5829282 - unknown germline . no 228 .
srip125624 chr8 28476807 28476807 . unknown germline . no 228 .
srip126603 chr8 65578121 65578121 . unknown germline . no 228 CYP7B1
srip128280 chr8 87315042 87315042 + unknown germline . no 228 .
srip130133 chr8 131041227 131041227 + unknown germline . no 228 .
srip131361 chr9 7741401 7741401 + unknown germline . no 228 .
srip132357 chr9 30495884 30495884 - unknown germline . no 228 .
srip133394 chr9 32463891 32463891 - unknown germline . no 228 DDX58
srip133624 chr9 34904794 34904794 - unknown germline . no 228 .
srip136499 chrX 14152005 14152005 - unknown germline . no 228 .
srip137228 chrX 54917144 54917144 + unknown germline . no 228 .
srip139778 chrX 98264296 98264296 - unknown germline . no 228 .
srip140096 chrX 102363190 102363190 + unknown germline . no 228 .
srip140802 chrX 119892837 119892837 - unknown germline . no 228 .
srip141075 chrX 122664864 122664864 - unknown germline . no 228 .
srip142258 chrY 10016651 10016651 . unknown germline . no 228 .